
Solving Inverse Problems with Conditional Diffusion Models
What is an inverse problem, and where do inverse problems appear in chemistry? In deep learning for chemistry, it is common to train a classifier
What is an inverse problem, and where do inverse problems appear in chemistry? In deep learning for chemistry, it is common to train a classifier
We live an a world where chemistry computation is increasingly competitive with experimentation. AlphaFold predicts protein structure with accuracy sufficient for many applications. In the
Neural sequence models have recently produced astonishing results in domains ranging from natural language to proteins and biochemistry. Current sequence models trained on text can explain
For the last decade, the field of deep learning and AI has been dominated by applications to images and text. However, in the past two
Extremely data-efficient ligand generation What is a sufficient number of data points to train a deep learning algorithm? 1,000? 1 million? 1 billion? Of course,
The study of structural biochemistry is based on the axiom that “structure determines function”. A corollary of that axiom is that, for proteins, “function is
In structure-based drug discovery, most methods rely on two key elements of accuracy: accurate protein structure modeling and accurate drug structure modeling. AlphaFold is able to predict
In a recent preprint from the Baker Lab, Jue Wang et. al. outlined a framework for protein design that uses protein structure prediction neural networks. This framework defines
How do you design a protein that binds to another protein given only the target protein structure? Until recently, you could use Rosetta to manually
What would you give to be able to train a neural network with 5% of the labels that you thought you needed? In the context